{ "_id": "6a105038acfb0bcc41ca108c", "Package": "superpc", "Type": "Package", "Title": "Supervised Principal Components", "Version": "1.12", "Date": "2020-10-19", "Authors@R": "c(person(\"Eric\", \"Bair\",\nrole = \"aut\",\nemail = \"ebair@email.unc.edu\"),\nperson(\"Jean-Eudes\", \"Dazard\",\nrole = c(\"cre\", \"ctb\"),\nemail = \"jean-eudes.dazard@case.edu\"),\nperson(\"Rob\", \"Tibshirani\",\nrole = \"ctb\",\nemail = \"tibs@stanford.edu\"))", "Author": "Eric Bair [aut], Jean-Eudes Dazard [cre, ctb], Rob Tibshirani\n[ctb]", "Maintainer": "Jean-Eudes Dazard ", "Description": "Does prediction in the case of a censored survival\noutcome, or a regression outcome, using the \"supervised\nprincipal component\" approach. 'Superpc' is especially useful\nfor high-dimensional data when the number of features p\ndominates the number of samples n (p >> n paradigm), as\ngenerated, for instance, by high-throughput technologies.", "NeedsCompilation": "no", "URL": "http://www-stat.stanford.edu/~tibs/superpc,\nhttps://github.com/jedazard/superpc", "License": "GPL (>= 3) | file LICENSE", "Archs": "i386, x64", "Repository": "https://jedazard.r-universe.dev", "Date/Publication": "2025-04-28 15:09:34 UTC", "RemoteUrl": "https://github.com/jedazard/superpc", "RemoteRef": "HEAD", "RemoteSha": "45faf22b7eba84e75d55ae17f1e04d781928df95", "Packaged": { "Date": "2026-05-10 05:38:13 UTC", "User": "root" }, "MD5sum": "a065bc8f9be33eaa2fcfb06725461532", "_user": "jedazard", "_type": "src", "_file": "superpc_1.12.tar.gz", "_fileid": "74583f496ca8d30a777abe2498c82008bb0f14a5d54d512a4438d975253dc5e5", "_filesize": 308475, "_sha256": "74583f496ca8d30a777abe2498c82008bb0f14a5d54d512a4438d975253dc5e5", "_created": "2026-05-10T05:38:13.000Z", "_published": "2026-05-22T12:46:48.448Z", "_distro": "noble", "_jobs": [ { "job": 77382246976, "time": 123, "config": "linux-devel-x86_64", "r": "4.7.0", "check": "NOTE", "artifact": "6901297442" }, { "job": 77382246999, "time": 123, "config": "linux-release-x86_64", "r": "4.6.0", "check": "NOTE", "artifact": "6901297482" }, { "job": 77382247334, "time": 175, "config": "macos-oldrel-arm64", "r": "4.5.3", "check": "NOTE", "artifact": "6901300047" }, { "job": 77382247241, "time": 157, "config": "macos-release-arm64", "r": "4.6.0", "check": "NOTE", "artifact": "6901298744" }, { "job": 77382246481, "time": 156, "config": "source", "r": "4.6.0", "check": "OK", "artifact": "6901283891" }, { "job": 77382246615, "time": 95, "config": "wasm-release", "r": "4.6.0", "check": "OK", "artifact": "7160814074" }, { "job": 77382246988, "time": 86, "config": "windows-devel", "r": "4.7.0", "check": "NOTE", "artifact": "6901293367" }, { "job": 77382247317, "time": 79, "config": "windows-oldrel", "r": "4.5.3", "check": "NOTE", "artifact": "6901292762" }, { "job": 77382246986, "time": 93, "config": "windows-release", "r": "4.6.0", "check": "NOTE", "artifact": "6901294131" } ], "_buildurl": "https://github.com/r-universe/jedazard/actions/runs/25620912533", "_status": "success", "_host": "GitHub-Actions", "_upstream": "https://github.com/jedazard/superpc", "_commit": { "id": "45faf22b7eba84e75d55ae17f1e04d781928df95", "author": "J-E Dazard, PhD <8091739+jedazard@users.noreply.github.com>", "committer": "J-E Dazard, PhD <8091739+jedazard@users.noreply.github.com>", "message": "Gitignore File\n", "time": 1745852974 }, "_maintainer": { "name": "Jean-Eudes Dazard", "email": "jean-eudes.dazard@case.edu", "login": "jedazard", "uuid": 8091739 }, "_registered": true, "_dependencies": [ { "package": "R", "version": ">= 3.5.0", "role": "Depends" }, { "package": "survival", "role": "Imports" }, { "package": "stats", "role": "Imports" }, { "package": "graphics", "role": "Imports" }, { "package": "grDevices", "role": "Imports" } ], "_owner": "jedazard", "_selfowned": true, "_usedby": 2, "_updates": [], "_tags": [], "_stars": 8, "_contributors": [ { "user": "jedazard", "count": 60, "uuid": 8091739 } ], "_userbio": { "uuid": 8091739, "type": "user", "name": "Jean-Eudes Dazard, PhD, MS", "description": "My research interest is in Machine Learning developments (e.g. Bump Hunting, Model Selection), GIS and AI with applications in Statistical Biology and Medicine" }, "_downloads": { "count": 11067, "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/superpc" }, "_mentions": 9, "_devurl": "https://github.com/jedazard/superpc", "_searchresults": 111, "_rbuild": "4.6.0", "_assets": [ "extra/citation.cff", "extra/citation.html", "extra/citation.json", "extra/citation.txt", "extra/contents.json", "extra/NEWS.html", "extra/NEWS.txt", "extra/readme.html", "extra/readme.md", "extra/superpc.html", "manual.pdf" ], "_homeurl": "https://github.com/jedazard/superpc", "_realowner": "jedazard", "_cranurl": true, "_releases": [ { "version": "1.00", "date": "2004-09-15" }, { "version": "1.01", "date": "2004-10-23" }, { "version": "1.02", "date": "2005-04-02" }, { "version": "1.03", "date": "2005-05-19" }, { "version": "1.05", "date": "2007-04-19" }, { "version": "1.06", "date": "2009-04-14" }, { "version": "1.07", "date": "2010-01-06" }, { "version": "1.08", "date": "2011-04-08" }, { "version": "1.09", "date": "2012-02-27" }, { "version": "1.12", "date": "2020-10-19" } ], "_exports": [ "superpc.cv", "superpc.decorrelate", "superpc.fit.to.outcome", "superpc.listfeatures", "superpc.lrtest.curv", "superpc.news", "superpc.plot.lrtest", "superpc.plotcv", "superpc.plotred.lrtest", "superpc.predict", "superpc.predict.red", "superpc.predict.red.cv", "superpc.predictionplot", "superpc.rainbowplot", "superpc.train" ], "_help": [ { "page": "superpc.cv", "title": "Cross-validation for supervised principal components", "topics": [ "superpc.cv" ] }, { "page": "superpc.decorrelate", "title": "Decorrelate features with respect to competing predictors", "topics": [ "superpc.decorrelate" ] }, { "page": "superpc.fit.to.outcome", "title": "Fit predictive model using outcome of supervised principal components", "topics": [ "superpc.fit.to.outcome" ] }, { "page": "superpc.listfeatures", "title": "Return a list of the important predictors", "topics": [ "superpc.listfeatures" ] }, { "page": "superpc.lrtest.curv", "title": "Compute values of likelihood ratio test from supervised principal components fit", "topics": [ "superpc.lrtest.curv" ] }, { "page": "superpc.news", "title": "Display the 'superpc' Package News", "topics": [ "superpc.news" ] }, { "page": "superpc.plot.lrtest", "title": "Plot likelhiood ratio test statistics", "topics": [ "superpc.plot.lrtest" ] }, { "page": "superpc.plotcv", "title": "Plot output from superpc.cv", "topics": [ "superpc.plotcv" ] }, { "page": "superpc.plotred.lrtest", "title": "Plot likelihood ratio test statistics from supervised principal components predictor", "topics": [ "superpc.plotred.lrtest" ] }, { "page": "superpc.predict", "title": "Form principal components predictor from a trained superpc object", "topics": [ "superpc.predict" ] }, { "page": "superpc.predict.red", "title": "Feature selection for supervised principal components", "topics": [ "superpc.predict.red" ] }, { "page": "superpc.predict.red.cv", "title": "Cross-validation of feature selection for supervised principal components", "topics": [ "superpc.predict.red.cv" ] }, { "page": "superpc.predictionplot", "title": "Plot outcome predictions from superpc", "topics": [ "superpc.predictionplot" ] }, { "page": "superpc.rainbowplot", "title": "Make rainbow plot of superpc and compeiting predictors", "topics": [ "superpc.rainbowplot" ] }, { "page": "superpc.train", "title": "Prediction by supervised principal components", "topics": [ "superpc.train" ] } ], "_readme": "https://github.com/jedazard/superpc/raw/HEAD/README.md", "_rundeps": [ "lattice", "Matrix", "survival" ], "_score": 7.423806639884054, "_indexed": true, "_nocasepkg": "superpc", "_universes": [ "jedazard" ], "_binaries": [ { "r": "4.7.0", "os": "linux", "version": "1.12", "date": "2026-05-10T05:40:05.000Z", "distro": "noble", "commit": "45faf22b7eba84e75d55ae17f1e04d781928df95", "fileid": "006dee8d94198d0eddd006ca2fe313bf5e2a45725e58bf8d9d645ad3ce99771f", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/jedazard/actions/runs/25620912533" }, { "r": "4.6.0", "os": "linux", "version": "1.12", "date": "2026-05-10T05:40:06.000Z", "distro": "noble", "commit": "45faf22b7eba84e75d55ae17f1e04d781928df95", "fileid": "7b55931fd323dff2c972ea1c3539c5b7677682c273bd7448af4ad08f65e06c36", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/jedazard/actions/runs/25620912533" }, { "r": "4.5.3", "os": "mac", "version": "1.12", "date": "2026-05-10T05:40:40.000Z", "commit": "45faf22b7eba84e75d55ae17f1e04d781928df95", "fileid": "6dc56462611fb31b466bff34b18ba255cf096fd0080f6073238ea3a9d9c7dd32", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/jedazard/actions/runs/25620912533" }, { "r": "4.6.0", "os": "mac", "version": "1.12", "date": "2026-05-10T05:40:27.000Z", "commit": "45faf22b7eba84e75d55ae17f1e04d781928df95", "fileid": "6ae589dad6116a713400dcdbaef90d114856e728eb91d11d74d72de4246e4a86", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/jedazard/actions/runs/25620912533" }, { "r": "4.7.0", "os": "win", "version": "1.12", "date": "2026-05-10T05:39:25.000Z", "commit": "45faf22b7eba84e75d55ae17f1e04d781928df95", "fileid": "561b54ed798ca05e6c065dbda80a2f8ccfe782c0859890df85b9bd1e963b35a5", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/jedazard/actions/runs/25620912533" }, { "r": "4.5.3", "os": "win", "version": "1.12", "date": "2026-05-10T05:39:20.000Z", "commit": "45faf22b7eba84e75d55ae17f1e04d781928df95", "fileid": "adbbb5e6b937d7a672e674e006f6529c009327a16004a8ceaccdb11c90be25af", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/jedazard/actions/runs/25620912533" }, { "r": "4.6.0", "os": "win", "version": "1.12", "date": "2026-05-10T05:39:31.000Z", "commit": "45faf22b7eba84e75d55ae17f1e04d781928df95", "fileid": "6f819d9a33fa6983b2b78f93f7348f920f30780973eb2e510e1cd334ca0fd946", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/jedazard/actions/runs/25620912533" }, { "r": "4.6.0", "os": "wasm", "version": "1.12", "date": "2026-05-22T12:46:32.000Z", "commit": "45faf22b7eba84e75d55ae17f1e04d781928df95", "fileid": "71fa831b2cc6eaabd7e558f578b3d6f5b8978de6e46919fa1993bc1e2ef4f3ab", "status": "success", "buildurl": "https://github.com/r-universe/jedazard/actions/runs/25620912533" } ] }